Microbial Oxidation of KE-298 Metabolites by Rhizopus sp.
and
Rhodococcus sp. Strains
Joji SASAKI, Hideo YOSHIDA, Kazuyuki TOMISAWA, Kimiyo TAKESHITA,
and Takashi ADACHI 1048
Action of Poly (-L-guluronate)lyase from Corynebacterium
sp. ALY-1
strain on Saturated Oligoguluronates
Yasuhito MATSUBARA,E Ken-ichi IWASAKI, and Tsuyoshi MURAMATSU
1055
Gene Cloning and Characterization of an Acidic Xylanase
from Acidobacterium capsulatum
Kenji INAGAKI, Ken NAKAHIRA, Kazuhisa MUKAI, Takashi TAMURA, and
Hidehiko TANAKA 1061
-L-Rhamnosidase of Sphingomonas sp. R1 Producing
an Unusual Exopolysaccharide of Sphingan
Wataru HASHIMOTOE and Kousaku MURATA 1068
Effects of Organic Solvents on Indigo Formation by Pseudomonas
sp. strain
ST-200 Grown with High Levels of Indole
Noriyuki DOUKYU, Tomonori ARAI, and Rikizo AONOE 1075
Isolation and Some Properties of Cytochrome c Oxidase Purified
from a
Bisulfite Ion Resistant Thiobacillus ferrooxidans Strain,
OK1-50
Kenji IWAHORI, Kazuo KAMIMURA, and Tsuyoshi SUGIOE 1081
Isolation of a Sulfur-oxidizing Bacterium That can Grow
under Alkaline pH,
from Corroded Concrete
Terunobu MAEDA, Atsunori NEGISHI, Yuko OSHIMA, Yasuo NOGAMI,
Kazuo KAMIMURA, and Tsuyoshi SUGIO,E 1087
Clustered Proline Residues around the Active-Site Cleft
in Thermostable
Oligo-1,6-glucosidase of Bacillus flavocaldarius KP1228E
Shin-ichi KASHIWABARA, Yoshifumi MATSUKI, Takahide KISHIMOTO, and Yuzuru
SUZUKIEE 1093
Phosphopentomutase of Bacillus stearothermophilus TH6-2:
The Enzyme and Its Gene ppm
Tomoki HAMAMOTO, Toshitada NOGUCHI, and Yuichiro MIDORIKAWA 1103
Molecular Cloning of the Transglutaminase Gene from Bacillus
subtilis and
Its Expression in Escherichia coliE
Katsunori KOBAYASHI,EE Ken-ichi HASHIGUCHI, Kenzo YOKOZEKI, and Shigeru
YAMANAKA 1109
Selective Induction of Interleukin-1 Production and Tumor
Killing Activity of Macrophages Through Apoptosis by the Inhibition of
Oxidative Respiration
Takao ASHIKAGA, Mariko HONMA, Kazuko MUNEMURA, Takao KATAOKA,
Toyoshige ENDO, Makari YAMASAKI, Junji MAGAE, and Kazuo NAGAI
1115
Changes in Size of Intracellular Pools of Coenzyme A and
Its Thioesters
in Escherichia coli K-12 Cells to Various Carbon Sources
and Stresses
Shigeru CHOHNAN, Hiroaki IZAWA, Hirofumi NISHIHARA, and Yoshichika
TAKAMURAE 1122
Purification and Characterization of Two Muconate Cycloisomerase
Isozymes from Aniline-assimilating Frateuria Species ANA-18
Shuichiro MURAKAMI,E Junji TAKEMOTO, Atsushi TAKASHIMA, Ryu SHINKE,
and Kenji AOKI 1129
Preparation and Preservation of Freeze-dried Cells of
Acetic Acid Bacteria with Aldehyde Oxidase Activity
Yukihiro NOMURA, Masanori YAMAMOTO, Kazunobu MATSUSHITA, and Hidehiko
KUMAGAI 1134
Isolation and Chemical Composition of the Sheath of Sphaerotilus
natans
Minoru TAKEDA,E Fumio NAKANO, Tomomi NAGASE,
Keishi IOHARA,EE and Jun-ichi KOIZUMI 1138
Isolation and Characterization of a Wound-inducible Ribonuclease
from Nicotiana glutinosa Leaves
Tohru KARIU,1 Kazunari SANO,1 Hidetoshi SHIMOKAWA,2 Riyoko ITOH,2
Nobuyuki YAMASAKI,1 and Makoto KIMURA1, 1144
Isolation and Amino Acid Sequence of a Protein-synthesis
Inhibitor
from the Seeds of Rye (Secale cereale)
Yuji MINAMI, Ken-ichi YAMAGUCHI, Fumio YAGI, Kenjiro TADERA, and
Gunki FUNATSU 1152
Hemagglutinating Activity of Extracellular Alkaline Metalloendopeptidases
from Vibrio sp. NUF-BPP1
Kazumasa FUKUDA,1 Nami HAMAGUCHI,1 Tatsuya ODA,1
Atsushi ISHIMATSU,2 and Tsuyoshi MURAMATSU1,E 1157
Comparative Bio-antimutagenicity of Common Vegetables
and
Traditional Vegetables in Kyoto
Yasushi NAKAMURA,E Emi SUGANUMA,EE Naomi KUYAMA, Kenji SATO,
and Kozo OHTSUKI 1161
Cytotoxicity Induced by Erythrina variegata Serine Proteinase
Inhibitors in Tumor Hematopoietic Stem Cell Lines
Hideki OHBA,E Masaaki NISHIKAWA, Makoto KIMURA, Nobuyuki YAMASAKI,
Sawako MORIWAKI, and Kyogo ITOH 1166
Synthesis of Artificial N-Glycopolypeptides Carrying N-Acetyllactosamine
and
Related Compounds and Their Specific Interactions with
Lectins
Xiaoxiong ZENG, Takeomi MURATA, Hirokazu KAWAGISHI,
Taichi USUI,E and Kazukiyo KOBAYASHI 1171
Synthesis and Octopaminergic-agonist Activity of 3-(Substituted
Phenyl)imidazolidine-2-thiones and Related Compounds
Akinori HIRASHIMA, Kenji SHINKAI, Eiichi KUWANO, Eiji TANIGUCHI,
and Morifusa ETO 1179
Chemical Modification of the Hemolytic Lectin CEL-III
by Succinic Anhydride: Involvement of Amino Groups in the Oligomerization
Process
Tomomitsu HATAKEYAMA,E Yumiko MATSUYAMA, Takako FUNADA, Sachiko
FUKUYAMA, Hiromiki KUWAHARA, Haruhiko AOYAGI, and Nobuyuki YAMASAKI
1185
New Sulfated Oligosaccharides Produced by Pseudomonas
-Agarase
from Gracilaria verrucosa Polysaccharide
Kazuyo NOMURA, Yukari NAITOH, Satsuki MURAMATSU, Yasuko YOSHIZAWA,
Jun TSUNEHIRO, Fumio FUKUI, and Masao ITOH 1190
Development and Application of an Effective Detection
Method for Fish Plasma Vitellogenin Induced by Environmental Estrogens
Shigeki YAMANAKA, Koji ARIZONO, Yoshiro MATSUDA, Kiyoshi
SOYANO,
Hiroshi URUSHITANI,E Taisen IGUCHI,E and Ryuzo SAKAKIBARA,E
1196
HPLC Method for Evaluation of the Free Radical-scavenging
Activity of Foods by Using 1,1-Diphenyl-2-picrylhydrazyl
Tomoko YAMAGUCHI, Hitoshi TAKAMURA,E Teruyoshi MATOBA,EE and Junji
TERAO 1201
Overproduction of DnaJ in Escherichia coli Improves in
Vivo Solubility of the Recombinant Fish-derived Transglutaminase
Kei-ichi YOKOYAMA, Yoshimi KIKUCHI, and Hisashi YASUEDA 1205
Structural Analysis of N-Linked Carbohydrate Chains of
Funnel Web Spider (Agelenopsis aperta) Venom Peptide Isomerase
Yasushi SHIKATA, Hiroshi OHE, Nariyasu MANO, Manabu KUWADA, and Naoki
ASAKAWA 1211
Imidacloprid and Related Compounds: Structure and Water
Solubility
of N-Alkyl Derivatives of ImidaclopridE
Shinzo KAGABU, Kazuhito YOKOYAMA, Kazuko IWAYA, and Masahiro TANAKA
1216
Note
Suppression by Water Extracts of Sophora Plants of Sucrose-induced
Hyperglycemia in Rats and Inhibition of Intestinal Disaccharidases
In Vitro
Hai-Chao SHI, Qu-Yun HUANG, Ryoichi YAMAJI, Hiroshi INUI,
Tomoyuki FUJITA, Kazutaka MIYATAKE, Yoshihisa NAKANO,
Toshiji TADA, and Keiichiro NISHIMURA1225
Note
Classification of Lactobacillus helveticus Strains by
Immunological Differences
in Extracellular Proteinases
Naoyuki YAMAMOTO,1 Hiroko ONO,1 Masafumi MAENO,1 Yuudai UEDA,2 Toshiaki
TAKANO,1
and Haruo MOMOSE2 1228
Note
Globulin and Albumin-2 Associated with Protein Bodies
in Amaranthus cruentus Seeds
Rika NAKAMURA,E Yotaro KONISHI,EE Akiko KOJIMA, and Nobuji NAKATANI
1231
Note
Relationship between Sulfaguanidine Resistance and Increased
Cellulose
Production in Acetobacter xylinum BPR3001E
Atsushi ISHIKAWA,E Takayasu TSUCHIDA, and Fumihiro YOSHINAGA
1234
Note
Inhibition of Immunoglobulin Production Stimulating Activity
of Glyceraldehyde-3-phosphate Dehydrogenase by Nucleotides
Takuya SUGAHARA and Takeshi SASAKI 1237
Note
Purification and Some Molecular Properties of Rice Germ
Calmodulin
Zen-ichi YOKOYAMA 1240
Note
Overexpression of an Archaeal Geranylgeranyl Diphosphate
Synthase
in Escherichia coli Cells
Chikara OHTO,E,, Hiroyuki NAKANE, Hisashi HEMMI, Shin-ichi
OHNUMA,
Shusei OBATA, and Tokuzo NISHINO 1243
Note
Efficiency of Targeted Gene Delivery of Ligand-Poly-L-Lysine
Hybrids
with Different Crosslinks
Hiroki UIKE, Ryuzo SAKAKIBARA, Katsuko IWANAGA, Mizuho IDE,
and Masatsune ISHIGUROE 1247
Note
Convenient Regioselective mono-2-O-Sulfonation of Cyclomaltooctaose
Katsunori TERANISHI, Saori TANABE, Makoto HISAMATSU, and Tetsuya YAMADA
1249
Note
Complete Amino Acid Sequences of Chitinase-1 and -2 from
Bulbs
of Genus TulipaE
Takeshi YAMAGAMI and Masatsune ISHIGURO 1253
Note
Essential Cys-Pro-Cys Motif of Caenorhabditis elegans
Copper Transport ATPase
Takao YOSHIMIZU, Hiroshi OMOTE, Tokumitsu WAKABAYASHI, Yoshihiro SAMBONGI,E
and Masamitsu FUTAI 1258
Note
Synthesis of Both Enantiomers of 15-Hexadecanolide, a
Sex Pheromone
Component of the Stink Bug, Piezodorus hybneri
Shigefumi KUWAHARA,E Tomoko TSURUTA, Walter Soares LEAL, and Osamu
KODAMA 1261
Preliminary Communication
Activation of the 20S Proteasome of Xenopus Oocytes by
Cardiolipin:
Blockage of the Activation of Trypsin-like Activity by
the Substrate
Shinpei YAMADA, Kentaro SATO, Masahiro URITANI, Toshinobu TOKUMOTO,
and Katsutoshi ISHIKAWA 1264
Preliminary Communication
RpoS-Dependent Expression of the Second Lysine Decarboxylase
Gene
in Escherichia coli
Yoshimi KIKUCHI,1,E Osamu KURAHASHI,1 Takahiro NAGANO,2 and Yoshiyuki
KAMIO2 1267
Preliminary Communication
Bio-deposition of Amorphous Silica by an Extremely Thermophilic
Bacterium, Thermus spp.
Fumio INAGAKI, Takushi YOKOYAMA, Katsumi DOI, Eiji IZAWA,
and Seiya OGATA,E 1271
-1-
Antibody Fragments as Inhibitors of Japanese Radish
Acid Phosphatase
Department of Food Science and Technology, Faculty of Agriculture, Kyushu
University, Fukuoka 812-8581, Japan
Food Research Laboratories, Ajinomoto Co. Inc., 1-1 Suzuki-cho, Kawasaki,
Kanagawa 210-8680, Japan
Received September 24, 1997
VH (heavy-chain variable region) and VL (light-chain variable region)
genes were amplified by PCR from hybridomas producing MAb-11 and MAb-18
which inhibited Japanese radish acid phosphatase. Nucleotide sequencing
of the V genes demonstrates that the MAbs contained similar VH and identical
VL domains. Initially, the VH and VL genes were expressed in Escherichia
coli as single-chain Fv (ScFv) fragments. Fragments ScFv-11 and ScFv-18,
named for MAb-11 and MAb-18, respectively, inhibited the enzyme activity
to the same extent as the intact MAbs. Both of the antibody fragments widely
cross-reacted with other phosphatases, including some phosphomonoesterases
and phosphodiesterases from different sources. ScFv-18 also inhibited acid
phosphatase from a different origin, but stimulated the activity of alkaline
phosphatase from calf intestine. The PCR-amplified VH and VL genes were
subsequently expressed separately in Escherichia coli as fusion products
with glutathione S-transferase. The fusion proteins had little effect on
Japanese radish acid phosphatase. Furthermore, a large number of recombinant
ScFv fragments specific to the acid phosphatase were generated by using
a bacteriophage expression system and a mouse ScFv gene library. These
ScFv fragments had a range of effects on the enzyme activity, including
inhibition, stimulation, and none. Among them, an ScFv fragment, designated
ScFv-G7, inhibited more strongly than ScFv-11 and ScFv-18.
acid phosphatase; inhibition; single-chain Fv (ScFv)
Medicinal Research Laboratories, and Pharmaceutical Research Laboratories,
Taisho Pharmaceutical Co. Ltd., 1-403 Yoshino-cho, Ohmiya-shi, Saitama
330-8530, Japan
@Received September 25, 1997
The metabolites of the antirheumatic agent KE-298
in humans, (|)-(2R)-M-4 [(|)-(2R)-4-(4-hydroxymethylphenyl)-2-methylthiomethyl-4-oxobutanoic
acid], (|)-||(2R)-M-5 [diastereomers of (|)-(2R)-4-(4-hydroxymethyl||||phenyl)-2-methylsulfinyl-methyl-4-oxobutanoic
acid], (|)-||||(2R)-M-6 [(|)-(2R)-4-(4-carboxyphenyl)-2-methylthio||||methyl-4-oxobutanoic
acid], and (|)-(2R)-M-7 [di||||astereomers of (|)-(2R)-4-(4-carboxyphenyl)-2-methyl||||sulfinylmethyl-4-oxobutanoic
acid] were synthesized based||||on microbial transformation. The substrate
KE-748 (ra||||cemic form of (|)-(2R)- and ({)-(2S)-4-(4-methyl||phenyl)-2-methylthiomethyl-4-oxobutanoic
acid: 7.5 g) was converted to (|)-(2R)-M-4 (1.84 g) using Rhizopus sp.
TF0040 in a 50-l jar fermentor. Specific cytochrome P-450 inhibitors, SKF-525-A
and metyrapone strongly inhibited the hydroxylation reaction. It was suggested
that cytochrome P-450 is responsible for the microbial reaction. Furthermore,
(|)-(2R)-M-4 (200 mg) was transformed to (|)-(2R)-M-6 (144 mg) by co-oxidation
with n-hexadecane as a carbon source using Rhodococcus sp. TA0250 in a
1.4-l jar fermentor. Starting from (|)-(2R)-M-4 and (|)-(2R)-M-6 obtained
as above, (|)-(2R)-M-5 and (|)-(2R)-M-7, respectively were chemically
synthesized by m-chloroperoxybenzoic acid oxidation.
microbial transformation; hydroxylation; cytochrome P-450; co-oxidation;
KE-298 metabolites
Kagawa 761-4421, Japan
Food Research Institute, Kagawa Prefectural Government, Goto, Takamatsu,
Kagawa 761-8031, Japan
Division of Biochemistry, Faculty of Fisheries, Nagasaki University,
Nagasaki 852-8131, Japan
Received October 2, 1997
A kinetic analysis of degradation of saturated oligoguluronates by
poly(-L-guluronate)lyase from Corynebacterium sp. ALY-1 strain was done.
The saturated oligoguluronates were prepared by hydrolyzing poly -1,4-L-guluronate
from alginate with HCl, and then by gel filtration on a Bio-Gel P-6 column.
The saturated pentaguluronate or above were rapidly degraded by the enzyme,
while tetraguluronate was slowly degraded. From the dependency of the catalytic
rate constant (kcat) on the degree of polymerization of substrates, the
enzyme was found to have a subsite size corresponding to hexaguluronate
units. The action pattern of the enzyme on hexaguluronate suggested that
the catalytic site of the enzyme was matched to the linkage between the
second and third uronic residue from the non-reducing end, since the substrate
was mainly split into a unsaturated tetramer and a saturated dimer from
a HPLC analysis.
Corynebacterium sp.; poly(-L-guluronate)lyase; subsite; active site
Department of Bioresources Chemistry, Faculty of Agriculture, Okayama University, Okayama 700-8530, Japan
Received October 23, 1997
@The gene xynA encoding an acid endo--1,4-xylanase from an acidophilic
bacterium, Acidobacterium capsulatum 161, was cloned and expressed in Escherichia
coli. The nucleotide sequence of the 1.6-kb DNA fragment containing xynA
was analyzed, revealing an open reading frame of 1,215 bp encoding a peptide
of 405 amino acid residues. The deduced amino acid sequence of XynA was
very similar to other xylanases that are from the glycosyl hydrolase family
10. XynA was purified to homogeneity by SDS-polyacrylamide gel electrophoresis
from E. coli transformants. The molecular mass and isoelectric point of
XynA were 41 kDa and 7.3, respectively. The xylanase activity of the cloned
XynA is an endo-acting enzyme that shows optimal activity at pH 5.0 and
65C, and is stable pH between 3.0 and 8.0. The Km and Vmax with oat spelt
xylan as a substrate at pH 5.0 and 30C are 3.5 mg/ml and 403 mol/min/mg.
xylanase; glycosyl hydrolase family 10; Acidobacterium capsulatum;
xynA cloning; nucleotide sequence
Research Institute for Food Science, Kyoto University, Uji, Kyoto 611-0011, Japan
Received October 23, 1997
A soil bacterium with -L-rhamnosidase was isolated from a cumulative
mixed culture containing a polysaccharide of gellan as a carbon source
and identified to be Sphingomonas paucimobilis, known as a potent producer
of gellan. The isolate (designated Sphingomonas sp. R1) produced an unusual
exopolysaccharide of sphingan (denoted HWR1) distinct from gellan. The
rhamnose in gellan was replaced with mannose in HWR1. The bacterium had
a peculiar cell surface covered with many complicated plaits. -L-Rhamnosidase
purified from Sphingomonas sp. R1 grown in the presence of naringin was
a monomer with a molecular mass of 110 kDa and most active at pH 8.0 and
50C. The enzyme required divalent metal ions for the activity and released
L-rhamnose from various rhamnosyl glycosides.
Sphingomonas; polysaccharide; sphingan; -L-rhamnosidase
Department of Bioengineering, Faculty of Bioscience and Biotechnology,
Tokyo Institute of Technology,
Nagatsuta 4259, Yokohama 226-8501, Japan
Received October 29, 1997
@The indole tolerance level of Pseudomonas sp. strain ST-200 was 0.25
mg/ml. The level was raised to 4 mg/ml when diphenylmethane was added to
the medium to 20 by volume. ST-200 grown in this two-phase culture system
containing indole (1 mg/ml) and diphenylmethane (0.2 ml/ml) produced a
water-soluble yellow pigment, isatic acid, and two water-insoluble and
diphenylmethane-soluble pigments, blue indigo and purple indirubin. The
amounts of the water-insoluble pigments corresponded to 0.5 (indigo)
and 0.2 (indirubin) of the indole added to the medium. Of the conditions
tried, indigo and indirubin were formed only when ST-200 was grown in the
two-phase system overlaid with organic solvents with appropriate polarity.
bioconversion of toxic compound; indigo formation; organic solvents;
persolvent fermentation; Pseudomonas sp.
Department of Biological Function and Genetic Resources Science, Faculty
of Agriculture, Okayama University,
1-1-1 Tsushima Naka, Okayama 700-8530, Japan
Received October 30, 1997
Sulfite ion (HSO-3) is one of the products when elemental sulfur is
oxidized by the hydrogen sulfide:ferric ion oxidoreductase of Thiobacillus
ferrooxidans AP19-3. Under the conditions in which HSO|3 is accumulated
in the cells, the iron oxidase of this bacterium was strongly inhibited
by HSO|3. Since cytochrome c oxidase is one of the most important components
of the iron oxidase enzyme system in T. ferrooxidans, effects of HSO|3
on cytochrome c oxidase activity were studied with the plasma membranes
of HSO|3-resistant and -sensitive strains of T. ferrooxidans, OK1-50 and
AP19-3. The enzyme activity of AP19-3 compared with OK1-50 was strongly
inhibited by HSO|3. To investigate the inhibition mechanism of HSO|3
in T. ferrooxidans, cytochrome c oxidases were purified from both strains
to an electrophoretically homogeneous state. Cytochrome c oxidase activity
of a purified OK1-50 enzyme was not inhibited by 5 mM HSO|3. In contrast,
the same concentration of HSO|3 inhibited the enzyme activity of AP19-3
50, indicating that the cytochrome c oxidase of OK1-50 was more resistant
to HSO|3 than that of AP19-3. Cytochrome c oxidases purified from both
strains were composed of three subunits. However, the molecular weight
of the largest subunit differed between OK1-50 and AP19-3. Apparent molecular
weights of the three subunits of cytochrome c oxidases were 53,000, 24,000,
and 19,000 for strain AP19-3 and 55,000, 24,000, and 19,000 for strain
OK1-50, respectively.
iron-oxidizing bacterium; Thiobacillus ferrooxidans; bisulfite ion;
resistance; cytochrome c oxidase
Hazama Corporation, Technical Research Institute, 515-1 Nishimukai,
Karima, Tsukuba 305-0822, Japan
Department of Biological Function and Genetic Resources Science,
Faculty of Agriculture, Okayama University, 1-1-1 Tsushima Naka, Okayama
700-8530, Japan
Received December 1, 1997
To study the early stages of concrete corrosion by bacteria, sulfur-oxidizing
bacterium strain RO-1, which grows in an alkaline thiosulfate medium (pH
10.0) was isolated from corroded concreate and characterized. Strain RO-1
was a Gram negative, rod-shaped bacterium (0.5--0.6~0.9--1.5 m). The
mean G{C content of the DNA of strain RO-1 was 65.0 mol. Optimum pH
and temperature for growth were 8.0. and 30--37C, respectively. When
grown in thiosulfate medium with pH 10.0, growth rate of the strain was
48 of that observed at the optimum pH for growth. Strain RO-1 used sulfide,
thiosulfate, and glucose, but not elemental sulfur or tetrathionate, as
a sole energy source. Strain RO-1 grew under anaerobic conditions in pepton-NO|3
medium containing sodium nitrate as an electron acceptor, and had enzyme
activities that oxidized sulfide, elemental sulfur, thiosulfate, sulfite,
and glucose, but not tetrathionate. The bacterium had an activity to assimilate
14CO2 into the cells when thiosulfate was used as an energy source. These
results suggest that strain RO-1 is Thiobacillus versutus. Strain RO-1
exuded Ca2{ from concrete blocks added to thiosulfate medium with pH 9.0
and the pH of the medium decreased from 9.0 to 5.5 after 22 days of cultivation.
In contrast, Thiobacillus thiooxidans strain NB1-3 could not exude Ca2{
in the same thiosulfate medium, suggesting that strain RO-1, but not T.
thiooxidans NB1-3, is involved in the early stage of concrete corrosion
because concrete structures just after construction contain calcium hydroxide
and have a pH of 12--13.
sulfur-oxidizing bacterium; Thiobacillus versutus; corroded concrete
Laboratory of Microbial Physiology and Applied Microbiology, Department of Applied Biochemistry, Kyoto Prefectural University, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan
Received October 30, 1997
The gene that coded for a cellular oligo-1,6-glucosidase (dextrin 6--D-glucanohydrolase,
EC 3.2.1.10) in Bacillus flavocaldarius KP1228 (FERM-P9542) cells growing
at 51--82C was expressed in Escherichia coli JM109. The enzyme had a
half-life of 10 min at 89.2C. Purification of the enzyme and its characterization
showed that the enzyme was identical with the native one. Its primary structure
of 529 residues with a molecular weight of 61,469 deduced from the gene
was 40--42 identical to the sequences of less thermostable oligo-1,6-glucosidases
from Bacillus cereus ATCC 7064, Bacillus coagulans ATCC 7050, and Bacillus
thermoglucosidasius KP1006.
@Sequence analysis showed that the B. flavocaldarius enzyme shared
14 proline residues at the same positions as in the three other enzymes,
and that the B. flavocaldarius enzyme had 22 of 33 additional proline residues
(cf. 1/5, 5/10, and 9/18 in the respective counterparts) in three long
polypeptides constituting the active-site cleft, which connected the third,
fourth, and eighth -strands to the corresponding third, fourth, and eighth
-helices in the (/)8-barrel.
thermostable oligo-1,6-glucosidase; gene cloning; Bacillus flavocaldarius;
proline sites; thermostability
Biochemicals Division, Yamasa Corporation, Choshi, Chiba 288-0056, Japan
Received November 4, 1997
@Phosphopentomutase catalyzes the transfer of an intramolecular phosphate
on ribose or deoxyribose, and is involved in the salvage pathway of nucleoside
synthesis. We identified a sequence 5-upstream of the genes for the nucleoside
phosphorylases of Bacillus stearothermophilus as the phosphopentomutase
(ppm) gene. The novel gene corresponded to an open reading frame of 1,179
nucleotides that is translated into a putative 393-amino acid protein with
a molecular weight of 43,735. The gene product, partially purified from
ppm-overexpressing Escherichia coli cells, was judged to be a monomer of
a 44-kDa polypeptide. The phosphopentomutase was found to catalyze the
phosphotransfer on not only ribose or deoxyribose but also arabinose or
dideoxyribose.
Bacillus stearothermophilus; phosphopentomutase; sequence homology;
characterization; nucleoside phosphorylase
Central Research Laboratories, Ajinomoto Co., Inc., Kawasaki-ku, Kawasaki, Kanagawa 210-0801, Japan
Received November 6, 1997
We cloned and characterized a gene, tEEl, encoding transglutaminase
in Bacillus subtilis. The tEEl gene contained a open reading frame 735-nucleotides
long that encoded a 245-residue protein with the molecular weight of 28,300.
The deduced amino acid sequence had little sequence similarity with sequences
of other transglutaminases from a Streptoverticillium sp. or from mammals.
The |10 and |35 regions of a putative promoter resembled the consensus
sequence for the K-dependent promoter. In addition, a sequence similar
to the consensus sequence for the GerE binding site was found upstream
from this region. These findings suggested that tEEl was transcribed
in the mother cells during a late stage of sporulation. Evidence for this
suggestion was that transglutaminase activity was detected in sporulating
cells during the same stage. Transglutaminase activity was detected in
Escherichia coli cells transformed with a plasmid for expression of the
tEEl gene.
Bacillus subtilis; cloning; transglutaminase
Department of Bioengineering, Tokyo Institute of Technology, 4259 Nagatsuta-cho,
Midori-ku,
Yokohama 226-0026, Japan
Department of Pharmaceutical Science, Kyoritsu College of Pharmacy,
1-5-30 Shiba-koen, Minato-ku,
Tokyo 105-0011, Japan
Department of Agricultural Chemistry, the University of Tokyo,
1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657 Japan
Received November 6, 1997
Suppression of mitochondrial respiration and increased glycolysis are
characteristic features of activated macrophages. We show here that antimycin
A, a respiratory inhibitor, induced interleukin-1 synthesis and tumoricidal
activity without inducing tumor necrosis factor or nitric oxide. The induction
of tumoricidal activity was resistant to inhibitors of tyrosine-specific
protein kinases and intracellular glycoprotein transport. The cognate interaction
between macrophages and target cells was not a prerequisite for the tumoricidal
activity. In contrast, lipopolysaccharide induced the production of interleukin-1,
tumor necrosis factor and nitric oxide, the induction of tumoricidal activity
being sensitive to genistein and brefeldin A. Antimycin A, like lipopolysaccharide,
induced the release of a cytoplasmic enzyme and apoptosis of macrophages.
Antimycin A showed anti-metastatic activity in vivo. These results suggest
that the inhibition of oxidative respiration would induce apoptosis and
the resultant release of soluble effector molecules of macrophages which
inhibit tumor metastasis in vivo.
interleukin-1; antimycin A; activated macrophage; apoptosis; anti-tumor
activity
Department of Bioresource Sciences, School of Agriculture, Ibaraki University,
Ami-machi, Iharaki 300-0393, Japan
Received November 10, 1997
@Intracellular pools of three CoA molecular species of coenzyme A,
CoASH, acetyl-CoA, and malonyl-CoA, in Escherichia coli K-12 cells were
studied by acyl-CoA cycling method in replacement culture. The sizes and
compositions of CoA pools starved for a carbon source changed within minutes
after the addition of one of various carbon sources. A large acetyl-CoA
pool formed after the addition of D-glucose, D-fructose, D-mannose, glycerol,
or sorbitol, but there was little change when L-glucose, sucrose, maltose,
succinate, or acetate was added. The -anomer of D-glucose was assimilated
10 times faster than the -anomer. Intracellular CoA pools also changed
with stress: in the pH, incubation temperature, or with osmotic stress.
The sizes and compositions of CoA pools were not affected by pH changing
between 4 and 8, but the breakdown of acetyl-CoA and CoASH was greater
at pH 9 than at pH 4 to 8. Production of acetyl-CoA was greatest at 40C,
and at 50C, an acetyl-CoA pool did not form at all and the size of the
CoASH pool declined. When the organism was stressed by the addition of
NaCl at concentrations of more than 0.6 M, little acetyl-CoA was produced.
The total CoA pool (the sum of the concentrations of CoASH, acetyl-CoA,
and malonyl-CoA) remained within the limits of 0.83--1.40 nmol/mg of dry
cell weight (0.30--0.52 mM). Whenever acetyl-CoA increased, CoASH decreased.
Therefore, the acetyl-CoA/CoASH ratio is an important index of facultative
anaerobes that reflects the state of carbon and energy metabolism in vivo.
CoA; Acetyl-CoA; Malonyl-CoA; Acyl-CoA Cycling Method; Escherichia
coli
Department of Biofunctional Chemistry, Faculty of Agriculture, Kobe
University,
1-1 Rokkodai-cho, Nada-ku, Kobe 657-8501, Japan
Received November 17, 1997
Two muconate cycloisomerases (MC I and MC II, EC 5.5.1.1) were purified
to homogeneity from an aniline-grown Frateuria sp. ANA-18. MC I and MC
II were similar in molecular mass, optimal pH, and pH stability but different
in thermostability, and some other enzymatic properties. NH2-terminal amino
acid sequences were different between the two isozymes, indicated that
these are encoded by different genes. Different inducible production of
MC I and MC II suggested that two catechol branches involved in the -ketoadipate
pathway function in Frateuria sp. ANA-18.
Frateuria; -ketoadipate pathway; muconate cycloisomerase; catechol
1,2-dioxygenase; aniline degradation
Somatech Center, House Foods Corporation, 1-5-7 Mikuriya-sakaemachi,
Higashiosaka-shi,
Osaka 577-8520, Japan
Department of Biological Chemistry, Faculty of Agriculture, Yamaguchi
University,
Yamaguchi 753-8790, Japan
Division of Applied Life Sciences, Graduate School of Agriculture,
Kyoto University,
Kyoto 606-8502, Japan
Received November 25, 1997
Freeze-dried cells of acetic acid bacteria were prepared to use as
an additive for manufacturing and processing foods. When the freeze-dried
cells were stored for 1 week at 5C, however, more than 50 of the original
activity of aldehyde oxidase (AOX) was lost.
@It was found that this decrease in AOX was caused by damage to both
the membrane-bound aldehyde dehydrogenase and terminal oxidase activities
involved in the aldehyde oxidase electron transport system of acetic acid
bacteria. The addition of 30 sucrose to the cell suspension prepared
in a McIlvaine buffer (pH 6) before lyophilization was found to be effective
for preventing the decrease of AOX activity. Cells freeze-dried in this
way lost no AOX activity at all during first 3 weeks of storage at 5C
and, even after 9 weeks, 80 of the original activity remained.
acetic acid bacteria; Acetobacter aceti; aldehyde oxidase; aldehyde
dehydrogenase; terminal oxidase
Division of Bioengineering, Faculty of Engineering Yokohama National
University,
Tokiwadai 79-5, Hodogaya, Yokohama 240-8501, Japan
Received November 28, 1997
A sheathed bacterium, Sphaerotilus natans, was cultured with vigorous
shaking in a medium containing peptone. Then the biomass was harvested
and treated with lysozyme, sodium dodecyl sulfate, and protease. With treatment,
1.6 mg of sheaths was obtained from 15 mg of biomass. For the preparation
of sheaths of high purity, cultivation must be in the absence of glucose
with sufficient aeration to prevent poly(3-hydroxybutyrate) accumulation.
Carbohydrate (54.1), protein (12.2), and lipid (1--3) were detected
in the sheaths by colorimetric reactions and solvent extraction. Gas-liquid
chromatography showed glucose and galactosamine to be present in the molar
ratio of 1:4. The most abundant amino acids in the sheath protein were
glycine (49.2 mol) and cysteine (24.6 mol). The sheaths were resistant
to agents that reduce disulfide bonds (dithiothreitol and 2-mercaptoethanol)
and to protease. However, sheathes were degraded completely by hydrazine,
and a heteropolysaccharide composed of glucose and galactosamine (1:4)
was released. The weight-average molecular weight of the polysaccharide
was estimated to be 1.2~105 by gel filtration chromatography with a low-angle
laser-light scattering photometer and a rotation index detector. A ladder
of 1.5-kDa peptides separable by sodium dodecyl sulfate gel electrophoresis
was obtained by partial hydrolysis of sheaths, suggesting the sheath protein
has repeating units of 1.5 kDa.
sheath; Sphaerotilus natans; isolation; chemical structure
1Laboratory of Biochemistry, Faculty of Agriculture, Kyushu University,
Fukuoka 812-8581, Japan
2Laboratory of Biology, Fukuoka Dental College, Fukuoka 814-0177, Japan
Received November 28, 1997
@A wound-inducible ribonuclease (RNase NW) was purified from leaves
of Nicotiana glutinosa. The purified RNase NW has an optimum pH around
5 and 7, and its base specificity is suggested based on the relative rates
of hydrolysis of homopolyribonucleotides to be a preference for guanine
base. The complete amino acid sequence of RNase NW was deduced by a combination
of protein and cDNA sequencings. The cDNA sequence includes the entire
coding sequence for a polypeptide with 229 amino acids including a putative
secretion signal peptide at the N-terminus composed of 25 amino acids.
The amino acids identified by the protein chemical methods are unambiguously
localized within the deduced amino acid sequence from the cDNA sequence.
Comparison of the sequence of RNase NW with those of other known plant
RNases showed that it was identical except for eight residues to that of
N. alata RNase NE, which is present in the style and pollen under normal
conditions and is induced in roots in response to phosphate starvation
[Dodds et al., Plant. Mol. Biol., 31, 227--238 (1996)]. RNase NW shows
considerable sequence similarity to other known RNases, sharing 57 to
84 identical residues. Northern blot analysis using an RNase NW cDNA
fragment as a probe showed that the RNase NW transcript was not detected
in leaves without wounding, but it was induced within 4 h after wounding
and then gradually decreased during 20 h.
amino acid sequence; cDNA sequence; Nicotiana glutinosa; ribonuclease;
wound-inducible RNase
Department of Biochemical Science and Technology, Faculty of Agriculture,
Kagoshima University,
Kagoshima 890-0065, Japan
Laboratory of Protein Chemistry and Engineering, Faculty of Agriculture,
Kyushu University,
Fukuoka 812-0053, Japan
Received December 1, 1997
A protein-synthesis inhibitor, designated RPSI, was isolated from the
seeds of rye (Secale cereale) using gel filtration and S-Sepharose column
chromatography. RPSI is a basic protein with an isoelectric point of over
10, and the concentration of protein required for 50 inhibition of protein
synthesis (IC50) of purified RPSI was about ten-fold the concentration
of ricin A-chain. The complete amino acid sequence of RPSI was discoverd
by analyzing the peptides and fragments obtained from the proteolytic digests
and by the cyanogen bromide- and hydroxylamine-cleavages of RPSI. RPSI
consists of 280 amino acid residues and has a molecular weight of 30,171.
RPSI has only 21 sequence identity with that of ricin A-chain, but all
five amino acid residues involved in the active site of ricin A-chain are
conserved in RPSI.
protein-synthesis inhibitor; ribosome-inactivating protein; amino acid
sequence; rye seed protein
1Division of Biochemistry, Faculty of Fisheries, Nagasaki University,
Nagasaki 852-8521, Japan
2Marine Research Institute, Nagasaki University, Nomozaki, Nagasaki
851-0505, Japan
Received December 4, 1997
Alkaline metalloendopeptidase (metalloprotease) AP1 (48 kDa) from Vibrio
sp. isolated from the intestine of a five-barred goatfish (Parupeneus trifasciatus)
was reported in our previous paper to produce AP2 (36 kDa) by releasing
a peptide fragment (molecular mass of about 12 kDa) from the C-terminal
end of AP1 by autodigestion.1) AP1||strongly agglutinated fish (flounder,
Paralichthys oli||||vaceus) and rabbit erythrocytes, and weakly chicken
eryth||||rocytes. In contrast, AP2 had no significant hemagglu||||tinating
activity toward any erythrocytes tested, except||for weak activity on flounder
erythrocytes, suggesting that the C-terminal region of AP1 may be required
for the strong hemagglutinating activity. The optimum temperature for the
hemagglutinating activity of AP1 was found to be lower than that for the
proteolytic activity. At acidic pHs (below pH 7.5), the hemagglutinating
activity of AP1 decreased, and its pH profile resembled that of the proteolytic
activity. The hemagglutinating activity of AP1 was not observed in the
presence of o-phenanthroline or synthetic and proteinous substrates, but
different kinds of saccharides and lipids had no effect. While the proteolytic
activity of AP1 was not affected by CaCl2, the hemagglutinating activity
of AP1 decreased with increases in CaCl2 concentrations. These results
suggested that the hemagglutinating activity of these proteases (AP1 and
AP2) was most likely caused by their proteolytic action on erythrocyte
cell surfaces.
hemagglutinin; alkaline protease; metalloprotease; microbial protease;
Vibrio sp.
Department of Food Sciences and Nutritional Health, Kyoto Prefectural
University,
Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan
Received December 8, 1997
Traditional vegetables in Kyoto are a unique group of vegetables that
have been cultivated in limited areas near Kyoto city. We compared the
traditional vegetables in Kyoto with common vegetables for the bio-antimutagenicity
of their extracts against UV-induced mutation of E. coli B/r WP2. Among
the traditional vegetables in Kyoto, Kamo eggplant (Solanaceae) and Katsura
oriental pickling melon (Cucurbitaceae) showed higher bio-antimutagenicity
and yield in the n-hexane, chloroform and ethyl acetate fractions than
their common vegetable counterparts. Shishigatani pumpkin (Cucurbitaceae)
possessed bio-antimutagenicity in the chloroform and ethyl acetate fractions,
but common pumpkin did not. Polyphenolic compounds in the ethyl acetate
fraction of plants are known to be related to antimutagenicity. However,
the intensity of bio-antimutagenicity was not correlated with the polyphenol
content in the ethyl acetate fractions of the present vegetables. In particular,
Kamo eggplant possessed both polyphenolic and non-polyphenolic bio-antimutagenic
sub-fractions in the ethyl acetate fraction. In the aqueous fraction, taro
(Dioscoreaceae) was the most capable among our samples, whether being of
common or traditional origin. Consequently, it is considered that some
traditional vegetables in Kyoto are superior to common vegetables in their
bio-antimutagenicity and that these could be used as starting materials
to identify new bio-antimutagens.
antimutagen; vegetable; UV-mutagenesis
Laboratory of Biochemistry, Faculty of Agriculture, Kyushu University,
Fukuoka 812-0053, Japan
Department of Applied Biological Sciences, Saga University, Saga
840-0027, Japan
Department of Immunology, Kurume University School of Medicine,
Kurume 830-0011, Japan
Received December 8, 1997
Based on the soluble MTT tetrazolium/formazan assay, we evaluated the
cytotoxicity of Erythrina variegata proteinase inhibitors in some tumor
hematopoietic stem cell lines. Among the proteinase inhibitors, EBI, which
belongs to the Bowman-Birk family of inhibitors, was cytotoxic in relatively
differentiated cells such as Molt4 and Jurkat derived from acute T lymphoblastic
leukemia (T-ALL) cells specifically, but ETIa and ECI, which are classified
into Kunitz family inhibitors, did not. It was suggested that the differences
in the cytotoxicity might be due to the molecular size of the inhibitors.
The succinylation of lysine residue(s) of EBI led to about 50 loss of
the trypsin inhibitory activity as compared with the authentic EBI. When
Molt4 cells were incubated with this derivative, no significant cytotoxicity
was observed. This suggests that the proteinase inhibitory activity might
be involved in the cytotoxicity in human tumor cell lines.
cytotoxicity; Erythrina variegata; proteinase inhibitors; tumor hematopoietic
stem cell
Department of Applied Biological Chemistry, Faculty of Agriculture,
Shizuoka University,
Ohya 836, Shizuoka 422-8529, Japan
Graduate School of Engineering, Nagoya University, Chikusa, Nagoya
464-8603, Japan
Received December 11, 1997
Artificial N-glycopolypeptides carrying N-acetyllactosamine (LacNAc)
or related compounds were synthesized. First, sugars were converted into
their corresponding -glycosylamines with ammonium hydrogen carbonate.
Then, the -glycosylamines were condensated with the carboxyl groups of
poly(L-glutamic acid). N-Glycopolypeptides with different degrees of substitution
of sugars were isolated by passage through a column of Sephadex G-25. These
synthetic polymers were used as model compounds in the analysis of oligosaccharide-lectin
interactions. Interactions with some lectins were investigated by agar-gel
double-diffusion tests and in terms of inhibition of hemagglutination.
A glycopolypeptide substituted with LacNAc reacted with Erythrina cristagalli
agglutinin (ECA), peanut (Arachis hypogaea) agglutinin (PNA), Ricinus communis
agglutinin-120 (RCA120), wheat germ (Triticum vulgaris)||agglutinin (WGA)
lectins, which recognize either galac||tosyl or N-acetylglucosamine (GlcNAc)
residues. Other synthetic glycopolymers carrying N-acetylisolactosamine,||GlcNAc,
N,N-diacetylchitobiose, or N,N,N-triacetyl||chitotriose also reacted
with WGA, and these last two polymers inhibited hemagglutination most.
Of these five glycopolypeptides, only the one substituted with LacNAc reacted
with ECA. These sugar-substituted glycopolypeptides interacted specifically
with the corresponding lectins, no matter how much shorter the sugar side
chains of the glycopolymers were than those of natural glycoproteins.
N-glycopolypeptide; glycopolymer; lectin; molecular recognition; glycotechnology
Department of Agricultural Chemistry, Kyushu University, Fukuoka 812-8581, Japan
Received December 11, 1997
3-(Substituted phenyl)imidazolidine-2-thiones (SPITs) and related compounds
were synthesized by cyclizing monoethanolamine hydrogen sulfate with arylisothiocyanates
in the presence of sodium hydroxide. The activity for stimulating adenylate
cyclase prepared from thoracic nerve cords of the American cockroach, Periplaneta
americana L., was examined with these compounds. A SPIT with a 2,6-diethylphenyl
group (48) was the only full agonist, the other SPIT derivatives being
partial agonists. Greater enzyme activation appeared to result from short-chain
alkyl rather than halogen substitution at the 2,6-positions of the aromatic
ring of SPITs. Increasing the chain length from methyl to ethyl in 2,6-disubstituted
SPIT caused an increase in the enzyme activation. Meanwhile, further increase
of the chain length from ethyl to isopropyl in 2,6-disubstituted SPIT caused
a decrease in the enzyme activation. Superimposition of energy-minimized
octopamine and 48 revealed structural and conformational similarities that
account for the higher Vmax value of 48. There was a marked decrease in
the enzyme activation after alkylating at C4 or C5 of the imidazolidine
ring of the potent SPITs. Thus, a certain degree of bulkiness and hydrophobicity
at the 2- and 6-positions on the phenyl ring of a SPIT and the N-terminal
was favorable for activating adenylate cyclase.
3-(substituted phenyl)imidazolidine-2-thiones; octopaminergic agonist;
adenylate cyclase; molecular modeling; Periplaneta americana
Department of Applied Chemistry, Faculty of Engineering, Nagasaki University,
Bunkyo-machi 1-14, Nagasaki 852-8521, Japan
Laboratory of Biochemistry, Faculty of Agriculture, Kyushu University,
Hakozaki 6-10-1, Fukuoka 812-8581, Japan
Received December 17, 1997
CEL-III is a Ca2{-dependent lectin from a marine invertebrate, Cucumaria
echinata, which shows strong hemolytic activity toward human and rabbit
erythrocytes. After binding to carbohydrate receptors, CEL-III oligomerizes
in the erythrocyte membrane to form ion-permeable pores, leading to the
colloid osmotic rupture of the cells. Since hemolysis was greatly increased
in the alkaline pH, especially above pH 9, involvement of amino groups
of CEL-III in its hemolytic activity was evaluated using chemical modification
by succinic anhydride. After modification of 7 amino groups per protein
molecule, the hemolytic activity of CEL-III was reduced to 23 of the
native protein, but hemagglutinating and carbohydrate-binding activities
were only slightly affected even after modification of 14 amino groups.
A circular dichroism spectrum of modified CEL-III showed almost no change
in the secondary structure from that of the native protein, indicating
that the decrease of hemolytic activity was not caused by partial unfolding
of the protein. Immunoblotting analysis of the erythrocyte membrane treated
with modified CEL-III showed a decrease in the formation of CEL-III oligomer
in the membrane in parallel with the decrease in hemolytic activity. These
results suggest that amino groups of CEL-III are involved in its oligomerization
in the cell membrane, and their modification leads to inactivation of the
protein without much influence on the carbohydrate-binding activity.
lectin; toxin; hemolysin; chemical modification; carbohydrate-binding
Shin Nihon Chemical Co., Ltd., 19-10 Showa-machi, Anjo, Aichi 446-0063,
Japan
Research and Development Center, Showa Sangyo Co., Ltd., 2-20-2 Hinode,
Funabashi, Chiba 273-0015, Japan
Received December 18, 1997
Polysaccharide (partially sulfated agarose) with macrophage-stimulation
activity, derived from Gracilaria verrucosa, was decomposed by two types
of -agarase (agarases II and IV) from Pseudomonas sp. O-148. The hydrolysates
were fractionated with ethanol precipitation and anion-exchange chromatography.
The resulting anionic oligosaccharides with sulfate groups were investigated
by 13C-NMR spectroscopy. While the spectra of oligosaccharides produced
by agarase IV showed identical patterns with those by -agarase I from
Pseudomonas atlantica and indicated the location of a sulfated saccharide
unit on the non-reducing end, another new type of saccharide was found
in the products by agarase II. The novel oligosaccharides by agarase II
had a neoagarobiose unit on their non-reducing end and had sulfated units
internally. This indicated the novelty of agarase II in cleavage fashion.
-agarase; sulfated oligosaccharide; preneoagarobiose unit
School of Pharmaceutical Sciences and Faculties of
Environmental Studies and
Fisheries of Nagasaki University, 1-14 Bunkyo-machi, Nagasaki
852-8131, Japan
EFaculty of Sciences of Yokohama City University, 22-2, Seto, Kanazawa-ku,
Yokohama 236-0027, Japan
Received December 22, 1997
Vitellogenin is a protein induced by estrogens, including environmental
chemicals with estrogenic activity. To measure the effects of environmental
estogens, we developed an effective and rapid one-step method of detecting
and purifying fish plasma vitellogenin using a high-performance anion-exchange
chromatography column, POROS-HQ. Vitellogenin in a plasma of estradiol-treated
male fish (mummichog and red sea bream) was eluted as a single peak with
a retention time of 10 minutes from the column, which gives an almost pure
preparation as assessed by SDS-PAGE. The lowest detectable amount of vitellogenin
was 2 g per assay. The method was used to analyze the plasma vitellogenin
level of aquacultured red sea breams caught in August, when the spawning
season is over, and usually no vitellogenin is detected in either females
or males, physiologically. However, the data showed that in addition to
a few females, some male fish synthesized vitellogenin, suggesting that
some chemicals or unknown factors with estrogenic activity have induced
fish in the ocean to produce vitellogenin.
endocrine disrupters; environmental estrogens; red sea bream; vitellogenin;
HPLC
Graduate School of Human Culture, Nara Womens University, Kitauoya-Nishimachi,
Nara 630-8506, Japan
EDepartment of Food Science and Nutrition, Nara Womens University,
Kitauoya-Nishimachi,
Nara 630-8506, Japan
Department of Nutrition, School of Medicine, The University of Tokushima,
Kuramoto-cho 3, Tokushima 770-8503, Japan
Received December 22, 1997
An HPLC method for evaluation of the free radical-scavenging activity
of foods by using 1,1-diphenyl-2-picrylhydrazyl (DPPH) is reported. The
activity was evaluated by measuring the decrease of DPPH detected at 517
nm. By using this novel method, we determined the free radical-scavenging
activity of several antioxidants: ascorbic acid, -tocopherol, Trolox,
and cysteine. The results gave good correlation between the radical-scavenging
activity determined by HPLC and by conventional colorimetry. This methodology
was applied to determine the free radical-scavenging activity of 8 beverages.
The activity of coffee was the highest, followed by red wine, green tea,
oolong tea, black tea, ros"e wine, white wine, and orange juice. The results
well agree with those of previous reports. This method is expected to be
useful for a simple and rapid determination of free radical-scavenging
activity in colored foods, because coloring substances in foods do not
interfere with the measurement.
radical-scavenging activity; 1,1-diphenyl-2-picrylhydrazyl; antioxidant;
beverage
Food Research Development Laboratories, and Central Research Laboratories,
Ajinomoto Co. Inc.,
1-1 Suzuki-cho, Kawasaki-ku, Kawasaki, Kanagawa, 210-0801, Japan
Received January 13, 1998
The overexpression of red sea bream (Pagrus major) transglutaminase
(TGase, E.C. 2.3.2.13) in Escherichia coli mostly leads to the accumulation
of biologically inactive enzyme. Although the solubility of the gene products
could be improved by cultivation at a lower temperature (26--28C), most
of the synthesized TGase was still in the form of insoluble aggregates.
The effects of overproduction of molecular chaperones on the intracellular
solubility of newly produced recombinant TGase were examined. The overexpression
of dnaK or groES/EL did not improve solubility. However, DnaJ greatly increased
the solubility of the recombinant TGase, resulting in active enzyme in
the presence of calcium ions. Co-expression of dnaK along with dnaJ further
increased the content of soluble TGase. Under our experimental conditions,
supplementation with both DnaJ and DnaK elevated the TGase activity in
the producer cells by roughly 4-fold, compared with the control strain
cultured at 30C. Thus, we found that DnaJ is important in controlling
the solubility of protein overproduced in E. coli.
Escherichia coli; DnaJ; transglutaminase; co-expression; texture
Tsukuba Research Laboratories, Eisai Co. Ltd., 5-1-3 Tokodai, Tsukuba-shi, Ibaraki 300-2635, Japan
Received January 26, 1998
The structure of the N-linked carbohydrate chains of peptide isomerase
from the venom of the funnel web spider (Agelenopsis aperta) has been analyzed.
Carbohydrates were released from peptide isomerase by hydrazinolysis and
reductively aminated with 2-aminopyridine. The fluorescent derivatives
were purified by phenol/chloroform extraction, followed by size-exclusion
HPLC. The structure of the purified pyridylamino (PA-) carbohydrate chains
were analyzed by a combination of two-dimensional HPLC mapping, sugar composition
analysis, sequential exoglycosidase digestions, and mass spectrometry.
The peptide isomerase contains six kinds of N-linked carbohydrate chains
of truncated high-mannose type, with a fucose 1-6 linked to the reducing
N-acetylglucosamine in approximately 80 of them.
N-glycan; peptide isomerase; two-dimensional HPLC mapping; trimannosyl
core structure; 1,6-fucosylation
Department of Chemistry, Faculty of Education, Gifu University, Yanagido, Gifu 501-1193, Japan
Received January 23, 1998
An intramolecular hydrogen bond between NHEEEO2N in insecticide,
imidacloprid (1), and its nitromethylene analog 15 was proved by NMR and
IR spectra. That electron delocalization over their planar moieties was
disrupted by alkylation at the imidazolidine nitrogen atom is demonstrated
by the hypsochromic shifts in UV and deshielding effect in NMR spectra.
Interestingly, the N-alkyl derivatives (C1-5) had greater water solubility
than 1, although increasing alkyl chain length decreased the solubility.
The hydrophilicity of the alkyl derivatives would result from remote charge
heads being formed as a result of the conjugation disruption by alkylation,
while the hydrophobicity of 1 could be ascribed to the charge distribution
over the conjugated system coupled with the intramolecular H-bonding. The
greater water solubility of 15 than 1 and contrastively small solubility
of the cyanoimine analogue are discussed based on the difference in their
steric crowding.
imidacloprid; log P; water solubility; molecular surface area; hydrogen
bonding
Department of Applied Biological Chemistry, Osaka Prefecture University,
Sakai, Osaka 599-8531, Japan
The State-Expense Medical Service, The Second Hospital of Fuzhou,
Fuzhou, Fujian, China
Research Institute for Advanced Science and Technology, Osaka Prefecture
University,
Sakai, Osaka 599-8570, Japan
Received September 4, 1997
Partially purified hot-water extracts of the roots of plants of the
Sophora family suppressed the increase in blood glucose concentration of
rats in the oral sugar tolerance test. The extracts also inhibited rat
intestinal sucrase and maltase. The most potent sample was about 15 times
more active than catechin, a positive control, in these experiments.
Sophora extract; blood glucose level; disaccharidase inhibition; sucrase;
oral sugar tolerance test
1RD Center, Calpis Co., Ltd., 11-10, 5-chome, Fuchinobe, Sagamihara,
Kanagawa 229-0006, Japan
2Department of Biological Science and Technology, Science University
of Tokyo, 2641 Yamazaki,
Noda, Chiba 278-0022, Japan
Received October 8, 1997
Polyclonal antibodies against an extracellular proteinase of Lactobacillus
helveticus CP53 were raised. The antibodies reacted with a 170-kDa enzyme
with activity and a 53-kDa protein that seemed to be a degradation product
of the 170-kDa proteinase from results of immunoblotting. The antibodies
reacted also with a 45-kDa extracellular proteinase of L. helveticus CP790.
However, monoclonal antibodies to the CP790 proteinase did not react with
the proteinase of L. helveticus CP53. Seventeen strains of L. helveticus
were tested for immunological reactivity with the two kinds of antibodies.
The strains all had the same reactivity as either strain CP53 or strain
CP790. Eleven strains with the 45-kDa proteinase were identified as L.
helveticus biovar jugurti because they did not ferment maltose, four other
strains with the 170- and 53-kDa proteins were identified as L. helveticus
biovar helveticus because they fermented maltose. The remaining two strains
dit not fit this pattern; they had both the 170- and 53-kDa proteins, but
classification by their sugar utilization showed them to be L. helveticus
biovar jugurti.
extracellular proteinase; Lactobacillus helveticus; immunological difference
Department of Food and Nutrition, Faculty of Human Life Science, Osaka
City University,
3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585, Japan
Received November 5, 1997
To examine whether albumin-2, a specific protein found only in amaranth
seeds so far, is associated with protein bodies, we isolated protein bodies
from Amaranthus cruentus seed embryos by rate-zonal centrifugation with
a sucrose gradient. Most protein bodies in the final preparation were intact
when observed by electron microscopy. Profiles by SDS-PAGE showed that
the isolated protein bodies contained globulin and albumin-2.
Amaranthus cruentus L; protein body; globulin; albumin-2
Bio-Polymer Research Co., Ltd., KSP RD B-1015, 3-2-1 Sakato, Takatsu, Kawasaki 213-0012, Japan
Received November 14, 1997
The mechanism of the increased cell growth and cellulose production
of Acetobacter xylinum subsp. sucrofermentans BPR3001E, a sulfaguanidine
(SG)-resistant mutant, was investigated. We found that adding p-aminobenzoic
acid (PABA) to cultures of the parent strain, BPR2001, led to increased
levels of intracellular adenosine-related purine compounds and increased
cellulose production. Furthermore, adding ATP increased the cellulose production
by permeabilized BPR2001 cells. On the other hand, the intracellular levels
of PABA and adenosine-related purine compounds in BPR3001E cells were higher
than those in BPR2001 cells. These results suggest that SG resistance increases
enhance cellulose production through increased levels of intracellular
high-energy compounds caused by increased PABA biosynthesis, reflecting
the promoted supply of cellulose precursors.
cellulose; sulfaguanidine; p-aminobenzoic acid; ATP
College of Agriculture, Ehime University, 3-5-7 Tarumi, Matsuyama, Ehime 790-0905, Japan
Received November 17, 1997
We have previously identified glyceraldehyde-3-phosphate dehydrogenase
as an immunoglobulin production stimulating factor (IPSF) which facilitated
immunoglobulin production by hybridomas and lymphocytes. The IPSF activity
of this enzyme was suppressed by the coexistence of some sorts of nucleotides.
We now report that the IPSF effect of GAPDH was suppressed by the coexistence
of DNA, the inhibiting effect of degraded DNA being inferior to that of
long-chain DNA. Both single-stranded and double-stranded synthetic polyribonucleotides
also inhibited the IPSF activity of GAPDH. Moreover, nicotinamide adenine
dinucleotide (NAD{) repressed the IPSF effect.
glyceraldehyde-3-phosphate dehydrogenase; human-human hybridoma; immunoglobulin
production stimulating factor; nucleotide; serum-free culture
Laboratory of Biochemistry, Kobe Yamate College, Kobe 650-0004, Japan
Received December 3, 1997
Calmodulin (CaM) from rice germ (Oryza sativa L) was purified to homogeneity
by hydrophobic interaction chromatography and gel filtration. The protein
showed a single spot by SDS-PAGE. This purified protein had multiple absorption
maxima at 276~279, 268, 265, 258, and 253 nm. Like other plant CaM, the
protein contained one mole of Tm3Lys, cysteine, and tyrosine, and tryptophan
was not detected. Hydrophobic properties of rice germ, spinach, and Neurospora
crassa CaM were directly tested by an HPLC method using an ODS-120T column
and by a hydropathy plotting method. Obvious hydrophobic differences with
rice germ CaM>spinach CaM>N. crassa CaM, were observed among calmodulins
from rice germ and others.
calmodulin; calcium binding; conformational change; hydrophobicity;
EF-hand protein
Bio Research Laboratory. Toyota Motor Corporation, 1 Toyota-cho, Toyota
471-8572, Japan
Department of Biochemistry and Engineering, Tohoku University,
Aoba Aramaki, Aoba-ku, Sendai 980-8579, Japan
Received December 10, 1997
@An archaeal geranylgeranyl diphosphate synthase was overexpressed
in Escherichia coli cells as fusion proteins. These fusion proteins retained
their thermostability and had higher specific activity than did a partially
purified native enzyme Previously reported. We purified 24.3 mg of MBP
(maltose-binding protein)-fusion protein and 5.4 mg of GST (glutathione
S-transferase)-fusion protein from a one-liter culture of E. coli.
@The MBP-fusion proteins existed in dimer, tetramer, octamer, or dodecamer
form, and their product specificities were altered according to the oligomerization.
The MBP-fusion protein has protease-sensitive sites in the portion corresponding
to geranylgeranyl diphosphate synthase.
Sulfolobus acidocaldarius; prenyldiphosphate; fusion protein; recombinant
enzyme
School of Pharmaceutical Sciences, Nagasaki University, 1-14 Bunkyo-machi,
Nagasaki, Nagasaki 852-8131, Japan
EFaculty of Protein Chemistry and Engineering, Graduate School of
Genetic Resources and Technology, Kyushu University, 6-10-1 Hakozaki, Higashi-ku,
Fukuoka 812-0053, Japan
Received December 10, 1997
Hybrids of a ligand protein crosslinked to a DNA binding protein have
been developed as gene delivery vehicles mediated by receptors. To identify
the effect of the crosslinks between the ligand and DNA binding protein
on gene expression caused by an internalized hybrid-DNA complex, we prepared
two kinds of transferrin-poly-L-lysine (TF-PL) hybrids: one was crosslinked
by probably cleavable disulfide bonds (TF-ss-PL) and the other was linked
by a probably uncleavable Schiffs base (TF-Schiff-PL). The binding affinity
of the hybrids to HeLa cells was not different. However, the expression
of a reporter gene (for luciferase) bound to these hybrids in HeLa cells
transfected with TF-Schiff-PL was greater than that of TF-ss-PL.
hybrid protein; gene delivery; gene targeting; transferrin
Faculty of Bioresources, Mie University, Kamihama, Tsu 514-8507, Japan
Received December 18, 1997
Regioselective mono-2-O-sulfonation of cyclomaltooctaose was conveniently
achieved by using the combination of sulfonyl imidazole and molecular sieves
in DMF. In this reaction, no 3-O- or 6-O-sulfonation products were produced.
The reactions do not require strict anhydrous or basic conditions, or specific
sulfonyl groups.
sulfonation; cyclomaltooctaose
Laboratory of Protein Chemistry and Engineering, Faculty of Agriculture,
Kyushu University,
Fukuoka 812-8581, Japan
Received December 24, 1997
The complete amino acid sequences of tulip bulb chitinase-1 and -2
(TBC-1 and -2) were determined. The sequences of the TBC-1 and TBC-2 were
solved by analysis of peptides derived by enzymatic digestions as well
as by chemical cleavages with cyanogen bromide (CNBr), o-iodosobenzoic
acid, and hydroxylamine. TBC-1 and TBC-2 both consisted of 275 amino acid
residues and had molecular masses of 30,825 and 30,863, respectively. They
shared 247 identical residues, that is 90 identity. Comparison of their
sequences with that of gladiolus bulb class IIIb chitinase-a (GBC-a) showed
that 63 of the residues of both TBC-1 and TBC-2 are identical to that
of GBC-a. From these results, it was seen that TBC-1 and -2 are class IIIb
chitinases. The characteristic difference in specific activity between
TBC-1 and -2 was also discussed on the basis of their amino acid sequences.
chitinase; amino acid sequence; tulip bulb; Tulipa bakeri; Tulipa tarda
Division of Biological Sciences, Institute of Scientific and Industrial
Research, Osaka University,
8-1 Mihogaoka, Ibaraki, Osaka 567-0047, Japan
Received January 19, 1998
Caenorhabditis elegans putative copper ATPase (CUA-1) had been functionally
expressed in a yeast ccc2 mutant (copper ATPase gene disruptant). We
found that CUA-1 with Cys-Pro-Cys to Cys-Pro-Ala mutation could not rescue
the yeast ccc2 mutant, suggesting that the carboxyl terminal cysteine
residue in the conserved Cys-Pro-Cys motif is essential for copper transport.
Caenorhabditis elegans; copper ATPase; cysteine residue; Menkes and
Wilson diseases; yeast CCC2 gene
Laboratory of Agricultural Chemicals, Faculty of Agriculture, Ibaraki
University,
Ami-machi, Inashiki-gun, Ibaraki 300-0393, Japan
Laboratory of Chemical Prospecting, National Institute of Sericultural
and Entomological Science,
Tsukuba, Ibaraki 305-8634, Japan
Received January 21, 1998
Both enantiomers of 15-hexadecanolide, a sex pheromone component of
the stink bug (Piezodorus hybneri), were synthesized by using the Yamaguchi
or Mitsunobu macrolactonization reaction of (R)-15-hydroxyhexadecanoic
acid prepared from ethyl (R)--hydroxybutyrate in 5 steps.
15-hexadecanolide; sex pheromone; stink bug; Piezodorus hybneri; macrolactonization
Department of Biology and Geosciences, and Department of Chemistry,
Faculty of Science,
Shizuoka University, 836 Oya, Shizuoka-shi, Shizuoka 422-8529, Japan
Received December 17, 1997
The effects of an activator, cardiolipin, on the three peptidase activities
of the 20S proteasome of Xenopus oocytes were examined. The trypsin-like
activity was activated when the enzyme was treated with cardiolipin before
the addition of the substrate, but there was no appreciable activation
when cardiolipin was added concomitantly with the substrate. On the other
hand, the chymotrypsin-like peptidase and peptidylglutamylpeptide hydrolase
(PGPH) were activated regardless of the sequence of addition. When very
low concentrations of the substrate (e.g. 0.1--0.5 M; about 1/100 of
the Km) were used, cardiolipin strongly activated trypsin-like peptidase
by the simultaneous addition but not after substrate addition. These results
suggest that the trypsin-type substrate produces a conformational change
in the enzyme in a concentration-dependent manner which makes the activator
sites inaccessible to cardiolipin.
20S proteasome; trypsin-like activity; activator cardiolipin; Xenopus
oocytes; conformational change
1Central Research Laboratories, Ajinomoto Co., Inc., 1-1 Suzuki-cho,
Kawasaki 210-8681, Japan
2Department of Applied Biological Chemistry, Faculty of Agriculture,
Tohoku University, 1-1 Tsutsumi-dori Amamiyamachi, Aoba-ku, Sendai 981-8555,
Japan
Received February 23, 1998
The second lysine decarboxylase gene (ldc) is at 4.7 min on the Escherichia
coli chromosome [Kikuchi et al., J. Baceriol. 179, 4486--4492 (1997)].
This report showes that the expression of ldc as well as cadA was induced
at stationary phase in the wild type of E. coli. The ldc was not expressed
in a rpoS deletion mutant of E. coli at any growing stage. In contrast,
cadA was expressed in the rpoS mutant. Thus, we conclude that the expression
of ldc but not cadA at stationary phase is regulated by a RpoS-dependent
mechanism (s) in E. coli.
Escherichia coli; lysine decarboxylase gene; rpoS; stationary phase;
expression
Microbial Genetics Division, Institute of Genetic Resources, Faculty
of Agriculture,
Department of Chemistry, Faculty of Science, and
Department of Mining, Faculty of Engineering, Kyushu University,
Higashi-ku, Fukuoka 812-8581, Japan
Received February 23, 1998
@The bio-deposition of amorphous silica, which occurred in vitro by
exposure to the extremely thermophilic bacterium Thermus spp. began from
the latter part of the exponential phase of growth of the bacteria. The
concentration with which the deposition occurred exceeded the solubility
of amorphous silica of neutral pH at the temperature 60~85C. Our observations
suggest that Thermus spp. promotes the formation of siliceous minerals
in a geothermal environment.
silica; Thermus spp.; bio-deposition; geothermal water